Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4003801 chr17:18532744 A/C CCDC144A chr17:16592851-16681195:+ -0.35 -5.89 7.21E-9 Box Plot
THCA rs4003801 chr17:18532744 A/C LOC162632 chr17:16614993-16707819:+ -0.61 -10.39 6.31E-23 Box Plot
THCA rs400893 chr21:43993286 A/G TLN1 chr9:35696945-35732392:- 0.22 6.06 2.84E-9 Box Plot
THCA rs401074 chr21:44013491 A/G TLN1 chr9:35696945-35732392:- 0.22 6.17 1.47E-9 Box Plot
THCA rs401754 chr6:27782538 T/A BTN3A2 chr6:26365387-26378548:+ -0.52 -9.14 1.83E-18 Box Plot
THCA rs401754 chr6:27782538 T/A ZFP57 chr6:29640169-29648887:- 0.58 7.03 7.03E-12 Box Plot
THCA rs401763 chr6:27782528 T/C BTN3A2 chr6:26365387-26378548:+ -0.52 -9.14 1.83E-18 Box Plot
THCA rs401763 chr6:27782528 T/C ZFP57 chr6:29640169-29648887:- 0.58 7.03 7.03E-12 Box Plot
THCA rs4020394 chr3:125818775 T/A ROPN1 chr3:123687368-123711025:- -0.34 -6.17 1.48E-9 Box Plot
THCA rs4020395 chr3:125818774 A/G ROPN1 chr3:123687368-123711025:- -0.34 -6.17 1.48E-9 Box Plot
THCA rs4030569 chr5:49667613 A/C LOC647121 chr1:121260910-121313686:+ 0.36 7.8 3.8E-14 Box Plot
THCA rs4030570 chr5:49667663 T/C LOC647121 chr1:121260910-121313686:+ 0.36 7.8 3.8E-14 Box Plot
THCA rs4030572 chr5:49671731 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.67E-14 Box Plot
THCA rs4030573 chr5:49672161 T/G LOC647121 chr1:121260910-121313686:+ 0.36 7.8 3.8E-14 Box Plot
THCA rs4034960 chr5:151677933 C/T FILIP1L chr3:99548985-99833357:- 0.22 6.16 1.58E-9 Box Plot